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Posts by Collection
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publications
Mathematical Model for Length Control by the Timing of Substrate Switching in the Type III Secretion System
PLoS Computational Biology, 2016
Comparative Characterization of Crofelemer Samples Using Data Mining and Machine Learning Approaches With Analytical Stability Data Sets
Journal of Pharmaceutical Chemistry, 2017
Nariya, M.K., Kim, J.H., Xiong, J., Kleindl, P.A., Hewarathna, A., Fisher, A.C., Joshi, S.B., Schöneich, C., Forrest, L.M., Middaugh, R.C., Volkin, D.B., Deeds, E.J.
Chemical Stability of the Botanical Drug Substance Crofelemer: A Model System for Comparative Characterization of Complex Mixture Drugs
Journal of Pharmaceutical Sciences, 2017
Hewarathna A., Mozziconacci, O., Nariya, M.K., Kleindl, P.A., Xiong, J., Fisher, A.C., Joshi, S.B., Middaugh, R.C., Volkin, D.B., Forrest, L.M., Deeds, E.J., Schöneich, C.
The Botanical Drug Substance Crofelemer as a Model System for Comparative Characterization of Complex Mixture Drugs
Journal of Pharmaceutical Sciences, 2017
Kleindl, P.A., Xiong, J., Hewarathna A., Mozziconacci, O., Nariya, M.K., Fisher, A.C., Deeds, E.J., Joshi, S.B., Middaugh, R.C., Schöneich, C., Volkin, D.B., Forrest, L.M.
Crosstalk and ultrasensitivity in protein degradation pathways
PLoS Computational Biology, 2020
Robustness and the evolution of length control strategies in the type III secretion system and flagellar hook
Biophysical Journal, 2021
MCMICRO: A scalable, modular image-processing pipeline for multiplexed tissue imaging
Nature Methods, 2021
Schapiro, D., Sokolov, A., Yapp, C., Muhlich, J. L., Hess, J., Lin, J.R., Chen, Y.A., Nariya, M.K., Baker, G.J., Ruokonen, J., Maliga Z., Jacobson C.A., Farhi S.L., Abbondanza, D., McKinley, E.T., Betts, C. Regev A., Coffey R.J., Lisa M., Coussens, L.M., Santagata, S., and Sorger P.K.
Multiplexed 3D atlas of state transitions and immune interaction in colorectal cancer
Cell, 2023
Ling, J.R., Wang, S., Coy, S., Chen, Y.A., Yapp, C., Tyler, M., Nariya, M.K., Heiser, C.N., Lau, K.S., Santagata, S., Sorger, P.K.
Paired evaluation of machine-learning models characterizes effects of confounders and outliers
Patterns, 2023
Proteomic profiling across breast cancer cell lines and models
Scientific Data, 2023
Kalocsay, M., Berberich, M.J., Everley, R.A., Nariya, M.K., Chung, M., Gaudio, B., Victor, C., Bradshaw, G.A., Hafner, M., Sorger P.K., Mills, C.E., Subramanian, K.
Unraveling the oscillatory dynamics of mRNA metabolism and chromatin accessibility during the cell cycle through integration of single-cell data
bioRxiv, 2024
Nariya, M.K., Santiago-Algarra, D., Tassy, O., Cerciat, M., Ye, T., Riba, A., Molina, N.
talks
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Conference Proceeding talk 3 on Relevant Topic in Your Field
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teaching
Physics laboratory
Undergraduate course, University of Kansas, Department of Physics and Astronomy, 2012
Instructor for general and intermediate physics laboratory courses between the years 2012-2016
Statistical Physics
Advanced undergraduate course, University of Kansas, Department of Physics and Astronomy, 2017
Led discussions, graded homework assignments, and designed exams for advanced undergraduate level course on statistical physics.
Introduction to Systems Biology
Master's level course, Université de Strasbourg, 2023
Provided assistance with teaching master’s level elective course